The detailed information of tRNA gene sequence


Sequence ID>W1810516353
Genome IDQCAB01000009
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesSAR86 cluster bacterium AG-339-G14 [QCAB]
Start position on genome 22649
End posion on genome 22573
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
aaattttttt
tRNA gene sequence 
CGGGGTGTAGCGCAGCCTGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCGGGGGTTCAAA
TCCCTCCACCCCGACCA
Downstream region at tRNA end position 
aatgtctaca
Secondary structure (Cloverleaf model)
>W1810516353	Pro	TGG
                   t      ACCA aatgtctaca
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | + | | |     A
    C       C G C G       G G G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     ATGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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