The detailed information of tRNA gene sequence


Sequence ID>W1810516571
Genome IDQCBC01000008
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesPelagibacteraceae bacterium AG-345-O09 [QCBC]
Start position on genome 16806
End posion on genome 16717
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccttgctcac
tRNA gene sequence 
GGAGAGATGGCTGAGCGGTTGAAAGCACCGGTCTTGAAAACCGGCAAAGGGGCAACTCTT
TCCTGGGTTCGAATCCCAGTCTCTCCGCCA
Downstream region at tRNA end position 
ttatttctca
Secondary structure (Cloverleaf model)
>W1810516571	Ser	TGA
                   c      GCCA ttatttctca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G A C C C     A
      C G A        G      | | | | |     G
    G       G T C G       C T G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        A     CAAAGGGGCAACTCTTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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