The detailed information of tRNA gene sequence


Sequence ID>SRA1006678
Genome IDSRR020488.174325
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 130
End posion on genome 56
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gccctcccct
tRNA gene sequence 
GGGCGATTAACTCAGTGGGAGAGTGCTACCTTCACACGGTAGAAGTCACTGGTTCAAACC
CAGTATCGCCCACCG
Downstream region at tRNA end position 
cattcgagcc
Secondary structure (Cloverleaf model)
>SRA1006678	Val	CAC
                   t      ACCG cattcgagcc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          C A
                    T     T G A C C     A
        G A        A      | | | | |     A
      T     C T C A       A C T G G     C
      G     | | | |                 T T
      G     G A G T
        G A        G     AAGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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