The detailed information of tRNA gene sequence


Sequence ID>W1810520875
Genome IDQCHD01000008
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesSAR86 cluster bacterium AG-390-O03 [QCHD]
Start position on genome 7976
End posion on genome 8049
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tacctcacaa
tRNA gene sequence 
GGCTGAGTAGCAAAGTGGTTATGCAGCGGATTGCAAATCCGTCTACGCCGGTTCGATTCC
GACCTCAGCCTCCA
Downstream region at tRNA end position 
tacaaaaatt
Secondary structure (Cloverleaf model)
>W1810520875	Cys	GCA
                   a      TCCA tacaaaaatt
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C
                     A - T
                     G - C          T T
                    T     C A G C C     A
        G A        A      |   | | |     G
      T     A A C G       G C C G G     C
      G       | | |                 T T
      G     A T G C
        T T        A     CTAC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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