The detailed information of tRNA gene sequence


Sequence ID>W1810520882
Genome IDQCHD01000012
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesSAR86 cluster bacterium AG-390-O03 [QCHD]
Start position on genome 11202
End posion on genome 11111
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aagctctata
tRNA gene sequence 
GGATAGTTGGCAGAGTCTGGTTGAATGCACCGGTCTTGAAAACCGGCAAGGGGTCAAACC
CTTCGGGGGTTCGAATCCCTCACTATCCGCCA
Downstream region at tRNA end position 
ccgcgcccat
Secondary structure (Cloverleaf model)
>W1810520882	Ser	TGA
                   a      GCCA ccgcgcccat
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
    C T G A        G      | + | | |     G
  T         G A C G       G G G G G     C
  G           | | |                 T T
  G         A T G C
    T T G A        A     CAAGGGGTCAAACCCTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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