The detailed information of tRNA gene sequence


Sequence ID>SRA1006703
Genome IDSRR020488.182081
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 163
End posion on genome 239
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ctattatagc
tRNA gene sequence 
GGGGGTGTAGCTCAGTTGGTTAGAGCACCTGCCTGTCACGCAGGGGGCCGAGGGTTCGAG
TCCCTTCACTCCCGCCA
Downstream region at tRNA end position 
taatctgagt
Secondary structure (Cloverleaf model)
>SRA1006703	Asp	GTC
                   c      GCCA taatctgagt
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T T C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGCC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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