The detailed information of tRNA gene sequence


Sequence ID>W1810523446
Genome IDQCKP01000018
Search identical group
Phylum/ClassChloroflexota
SpeciesSAR202 cluster bacterium AG-410-A08 [QCKP]
Start position on genome 1631
End posion on genome 1556
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
agatttatgc
tRNA gene sequence 
AGGAGTGTAGCTCAGCTGGCAGAGCATCGGTCTCCAAAACCGAGGGCCGAGGGTTCGAAT
CCTTCCACTCCTGCCA
Downstream region at tRNA end position 
gtcgttttag
Secondary structure (Cloverleaf model)
>W1810523446	Trp	CCA
                   c      GCCA gtcgttttag
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     C T T C C     A
      C G A        A      | | + | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGCC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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