The detailed information of tRNA gene sequence


Sequence ID>W1810524045
Genome IDQCLN01000024
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesPelagibacteraceae bacterium AG-414-M23 [QCLN]
Start position on genome 5647
End posion on genome 5558
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gcaaccagat
tRNA gene sequence 
GGAGAGATGGCTGAGCGGTTGAAAGCACCGGTCTTGAAAACCGGCAAAGGGGCAACTCTT
TCCTGGGTTCGAATCCCAGTCTCTCCGCCA
Downstream region at tRNA end position 
ttaaagtggc
Secondary structure (Cloverleaf model)
>W1810524045	Ser	TGA
                   t      GCCA ttaaagtggc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G A C C C     A
      C G A        G      | | | | |     G
    G       G T C G       C T G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        A     CAAAGGGGCAACTCTTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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