The detailed information of tRNA gene sequence


Sequence ID>W1810524054
Genome IDQCLO01000002
Search identical group
Phylum/ClassActinomycetota
SpeciesAcidimicrobiales bacterium AG-414-N20 [QCLO]
Start position on genome 137495
End posion on genome 137590
Amino Acid Sec
Anticodon TCA
Upstream region at tRNA start position 
ggttttctat
tRNA gene sequence 
GGAGGTGTCCGAGTACCTGGTGGGCTCCCCCGCCTTCAAAGCGGGCGGGACAGGCGATCC
CTGTCCGGCGGGTTCGATTCCCGTCCACCTCCGCCA
Downstream region at tRNA end position 
gattattttt
Secondary structure (Cloverleaf model)
>W1810524054	Sec	TCA
                   t      GCCA gattattttt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     T   C          T T
                    C     T G C C C     A
      C C A        C      + | | | |     G
    T       T G A G       G C G G G     C
    G       + | | |                 T T
    G       G C T C
      T G G        C     CGGGACAGGCGATCCCTGTCCG
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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