The detailed information of tRNA gene sequence


Sequence ID>W1810525519
Genome IDQCNS01000002
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesSAR116 cluster bacterium AG-426-I14 [QCNS]
Start position on genome 105353
End posion on genome 105429
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
agaagtatat
tRNA gene sequence 
CGGGGCGTAGCGCAGTCTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGGGAGTTCGAA
TCTCTCCGCCCCGACCA
Downstream region at tRNA end position 
acaagcattt
Secondary structure (Cloverleaf model)
>W1810525519	Pro	TGG
                   t      ACCA acaagcattt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T C T C     A
      T G A        A      | + | | |     G
    C       C G C G       G G G A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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