The detailed information of tRNA gene sequence


Sequence ID>SRA1006749
Genome IDSRR020488.194762
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 124
End posion on genome 50
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aaattcaacc
tRNA gene sequence 
GGGGTGGTAGTTCAGCTGGTTAGAATGCCTGCCTGTCACGCAGGAGGTCGCGGGTTCGAA
TCCCGTCCATCCCGCtt
Downstream region at tRNA end position 
ctttaatttt
Secondary structure (Cloverleaf model)
>SRA1006749	Asp	GTC
                   c      GCtt ctttaatttt
                     G - C
                     G - C
                     G - C
                     G + T
                     T - A
                     G - C
                     G - C          T A
                    T     T G C C C     A
      C G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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