The detailed information of tRNA gene sequence


Sequence ID>SRA1006767
Genome IDSRR020488.202587
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 33
End posion on genome 119
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaataaaaaa
tRNA gene sequence 
GGAAAAGTGGCTGAGTGGTTTAAAGCACTGGTTTGCTAAACCAACATACACTTTTGTGTA
TCAAGGGTTCGAATCCCTTCTTTTCCGatt
Downstream region at tRNA end position 
ataaattatt
Secondary structure (Cloverleaf model)
>SRA1006767	Ser	GCT
                   a      Gatt ataaattatt
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     A - T
                     G - C          T A
                    T     T T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       A A G G G     C
    G         | | |                 T T
    T       A A G C
      T T A        A     CATACACTTTTGTGTATC
                    C   A
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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