The detailed information of tRNA gene sequence


Sequence ID>SRA1006790
Genome IDSRR020488.209904
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 265
End posion on genome 188
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
cctaccatct
tRNA gene sequence 
GACCCGTTCGTCTAGTCAGGTCCAGGACACCGGGTTTTCATCCCGGCAACACGGGTTCGA
ATCCCGTACGGGTTACCA
Downstream region at tRNA end position 
ttatcccaaa
Secondary structure (Cloverleaf model)
>SRA1006790	Glu	TTC
                   t      ACCA ttatcccaaa
                     G + T
                     A - T
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     T G C C C     A
    C T G A        C      | | | | |     G
  A         T C T G       A C G G G     C
  G         + | | |                 T T
  G         G G A C
    T C C A        A     CAAC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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