The detailed information of tRNA gene sequence


Sequence ID>SRA1006802
Genome IDSRR020488.215681
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 101
End posion on genome 177
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaaatctaat
tRNA gene sequence 
AGGAGTGTAGCTCAATTAGGTAGAGCACCGGTCTCCAAAACCGGGGGTTGCAGGTTCGAT
TCCTGTCACTCCTGCTA
Downstream region at tRNA end position 
gcattgttta
Secondary structure (Cloverleaf model)
>SRA1006802	Trp	CCA
                   t      GCTA gcattgttta
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T T
                    T     T G T C C     A
      T A A        A      + | | | |     G
    T       C T C G       G C A G G     C
    A       | | | |                 T T
    G       G A G C
      G T A        A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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