The detailed information of tRNA gene sequence


Sequence ID>SRA1006810
Genome IDSRR020488.216920
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 223
End posion on genome 133
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccgcaaactt
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTCTAAAGCGCTCGCCTGCTAAGCGAGTGGGGGACAAAGTCCC
CTCGAGGGTTCAAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
agcgcccgta
Secondary structure (Cloverleaf model)
>SRA1006810	Ser	GCT
                   t      GCCA agcgcccgta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     A
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      C T A        G     TGGGGGACAAAGTCCCCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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