The detailed information of tRNA gene sequence


Sequence ID>SRA1006812
Genome IDSRR020488.217373
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 187
End posion on genome 112
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
atcacagatt
tRNA gene sequence 
GGGGGTATAGTATAGCCCGGTATTATTACCGGCTCCAGACCGGTGGAGGGGGGTTCAAAT
CCCTCTGCCCCCACCA
Downstream region at tRNA end position 
taaaactcac
Secondary structure (Cloverleaf model)
>SRA1006812	Trp	CCA
                   t      ACCA taaaactcac
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T A
                    T     C T C C C     A
      C G A        A      | + | | |     A
    C       T A T G       G G G G G     C
    C         | | +                 T T
    G       T T A T
      G T A        T     GGAG
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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