The detailed information of tRNA gene sequence


Sequence ID>SRA1006814
Genome IDSRR020488.217818
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 163
End posion on genome 239
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aaaataattt
tRNA gene sequence 
GGGGTAGTAGTTCAGTTGGTTAGAACGCCGGCCTGTCAAGCCGGAGGTCGCGGGTTCGAG
TCCCGTCTATCCCGCAA
Downstream region at tRNA end position 
ctttcaatga
Secondary structure (Cloverleaf model)
>SRA1006814	Asp	GTC
                   t      GCAA ctttcaatga
                     G - C
                     G - C
                     G - C
                     G + T
                     T - A
                     A - T
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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