The detailed information of tRNA gene sequence


Sequence ID>SRA1006825
Genome IDSRR020488.221152
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 48
End posion on genome 122
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
tggagagttt
tRNA gene sequence 
GGGCGATTAGTGTAGTCTGGATATCATTTGGCGCTTCGGACGCCAGGACACGGGTTCGAA
TCCTGTATCGCCCACtc
Downstream region at tRNA end position 
tcagcatggg
Secondary structure (Cloverleaf model)
>SRA1006825	Arg	TCG
                   t      ACtc tcagcatggg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T A
                    T     T G T C C     A
    C T G A        A      | | + | |     G
  T         T G T G       A C G G G     C
  G           | | +                 T T
  G         T C A T
    A T A          T     GGAC
                    T - A
                    G - C
                    G - C
                    C - G
                    G - C
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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