The detailed information of tRNA gene sequence


Sequence ID>SRA1006847
Genome IDSRR020488.229706
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 207
End posion on genome 281
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
taaattttta
tRNA gene sequence 
ATCGGTTTGGTGTTAGTGGTAGCACGGCAGTCTCCAAAACTGAAGGCGGGGGTTCGATTC
CTCCAACCGGTGCCA
Downstream region at tRNA end position 
aataannnnn
Secondary structure (Cloverleaf model)
>SRA1006847	Trp	CCA
                   a      GCCA aataannnnn
                     A - T
                     T + G
                     C - G
                     G - C
                     G - C
                     T - A
                     T - A          T T
                    T     C C T C C     A
      G A T        G      | | + | |     G
    T       T G T G       G G G G G     C
    G       + | | |                 T T
    G       G C A C
      T A          G     AGGC
                    G   A
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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