The detailed information of tRNA gene sequence


Sequence ID>SRA1006855
Genome IDSRR020488.236986
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 98
End posion on genome 172
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
aaacgcacct
tRNA gene sequence 
GCCCCTTTGGCGCAATCGGATAGCGCATACGACTTCTAATCGTGAGGTTGTGGGTTCAAG
TCCCACAAGGGGTACtc
Downstream region at tRNA end position 
aatcaatagt
Secondary structure (Cloverleaf model)
>SRA1006855	Arg	TCT
                   t      ACtc aatcaatagt
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A
                     T - A          T G
                    T     C A C C C     A
      T A A        G      | | | | |     A
    C       C G C G       G T G G G     C
    G       | | | |                 T T
    G       G C G C
      A T A        A     AGGTT
                    T + G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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