The detailed information of tRNA gene sequence


Sequence ID>SRA1006889
Genome IDSRR020488.254295
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 109
End posion on genome 183
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
accatatttt
tRNA gene sequence 
GGCGGCGTAGCTCAGTTGGTTAGAGCGCTCGACTCATAATCGGGAGGTCGACAGTTCAAA
TCTGTCCGCCGCTACag
Downstream region at tRNA end position 
ttagtaaata
Secondary structure (Cloverleaf model)
>SRA1006889	Met	CAT
                   t      ACag ttagtaaata
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T G T C     A
      T G A        A      | | | | |     A
    T       C T C G       G A C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T + G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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