The detailed information of tRNA gene sequence


Sequence ID>SRA1006927
Genome IDSRR020488.268361
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 148
End posion on genome 72
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
attaaaaatt
tRNA gene sequence 
GGCGGCGTAGCTCAGTTGGTTAGAGCACCGGAATCATAATCCGGGTGTCGTAGGTTCGAG
TCCTACCGCCGCTACAA
Downstream region at tRNA end position 
gaaattaaat
Secondary structure (Cloverleaf model)
>SRA1006927	Met	CAT
                   t      ACAA gaaattaaat
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C A T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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