The detailed information of tRNA gene sequence


Sequence ID>SRA1006937
Genome IDSRR020488.271523
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 149
End posion on genome 59
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttttaaatat
tRNA gene sequence 
GGAGAGATGGCAGAGTCTGGCTGAATGCGCTGCACTCGAAATGCAGTTTACACTTAGTGT
AACGGGGGTTCGAATCCCTCTCTCTCCGCAA
Downstream region at tRNA end position 
ttttgataat
Secondary structure (Cloverleaf model)
>SRA1006937	Ser	CGA
                   t      GCAA ttttgataat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    C T G A        G      | + | | |     G
  T         G A C G       G G G G G     C
  G           | | |                 T T
  G         A T G C
    C T G A        G     TTTACACTTAGTGTAAC
                    C - G
                    T - A
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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