The detailed information of tRNA gene sequence


Sequence ID>SRA1006960
Genome IDSRR020488.279820
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 192
End posion on genome 119
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gtccacaccT
tRNA gene sequence 
GATTCTATAGTTTAATGGTTAGAACGTGTCCCTGTCACGGACATAGTTGGGGTTCGACTC
CCCATAGAATCGTtc
Downstream region at tRNA end position 
gacaaataat
Secondary structure (Cloverleaf model)
>SRA1006960	Asp	GTC
                   T      GTtc gacaaataat
                     G - C
                     A - T
                     T - A
                     T - A
                     C - G
                     T - A
                     A - T          T C
                    T     A C C C C     A
      T A A        A      | | | | |     G
    G       T T T G       T G G G G     C
    G       + | | |                 T T
    T       G A A C
      T A          G     TAGT
                    T - A
                    G - C
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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