The detailed information of tRNA gene sequence


Sequence ID>SRA1006997
Genome IDSRR020488.292106
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 244
End posion on genome 168
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aactgctgat
tRNA gene sequence 
CGCGGGATGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGTCGGTTCAAA
TCCGGCTCCCGCAACCA
Downstream region at tRNA end position 
atttaaaacc
Secondary structure (Cloverleaf model)
>SRA1006997	Met	CAT
                   t      ACCA atttaaaacc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G G C C     A
      C G A        G      | + | | |     A
    C       C G A G       G T C G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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