The detailed information of tRNA gene sequence


Sequence ID>SRA1007013
Genome IDSRR020488.297276
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 117
End posion on genome 45
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tattagatgt
tRNA gene sequence 
GGGCGTTTGGTCTAGTGGCTATGATTCCTGCTTTGGGTGCAGGAGGTCCCGAGTTCAAAT
CTCGGATCGCCCCaac
Downstream region at tRNA end position 
ttttttgttt
Secondary structure (Cloverleaf model)
>SRA1007013	Pro	TGG
                   t      Caac ttttttgttt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T   T
                     T - A          T A
                    T     G G C T C     A
      T G A        G      | | | | |     A
    G       T C T G       C C G A G     C
    G         | | +                 T T
    C       T G A T
      T A          T     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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