The detailed information of tRNA gene sequence


Sequence ID>SRA1007020
Genome IDSRR020488.300878
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 191
End posion on genome 118
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttggttgaac
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCAGTGGACTCATAATCCATTGGTCGGAGGTTCGAG
TCCTCCCGGGCCCAaat
Downstream region at tRNA end position 
ttcgaaaaaa
Secondary structure (Cloverleaf model)
>SRA1007020	Met	CAT
                   c      Aaat ttcgaaaaaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C C T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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