The detailed information of tRNA gene sequence


Sequence ID>SRA1007026
Genome IDSRR020488.303005
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 240
End posion on genome 150
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atatatcaac
tRNA gene sequence 
GGAAGAGTGGGTGAGTTGGCTTAAACCAGCAGTTTGCTAAATTGCCGAAGGAGCAATCCT
TCCAAGGGTTCGAATCCCTTCTCTTCCGCCA
Downstream region at tRNA end position 
tttaatacaa
Secondary structure (Cloverleaf model)
>SRA1007026	Ser	GCT
                   c      GCCA tttaatacaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     T T C C C     A
    T T G A        G      | | | | |     G
  G         G T G G       A A G G G     C
  G           | | |                 T T
  C         A A C C
    T T A          A     CGAAGGAGCAATCCTTCC
                    G - C
                    C - G
                    A - T
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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