The detailed information of tRNA gene sequence


Sequence ID>SRA1007059
Genome IDSRR020488.313715
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 96
End posion on genome 19
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gtagagtatt
tRNA gene sequence 
GGCCCCTTCGTCTAGTCAGGTCTAGGACGCCAGGTTTTCATCCTGGTAACACCGGTTCGA
ATCCGGTAGGGGTCACCA
Downstream region at tRNA end position 
cgttttcaag
Secondary structure (Cloverleaf model)
>SRA1007059	Glu	TTC
                   t      ACCA cgttttcaag
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     T G G C C     A
    C T G A        C      | | | | |     G
  A         T C T G       A C C G G     C
  G         + | | |                 T T
  G         G G A C
    T C T A        G     TAAC
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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