The detailed information of tRNA gene sequence


Sequence ID>SRA1007083
Genome IDSRR020488.326574
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 173
End posion on genome 78
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gtaaaaattt
tRNA gene sequence 
GGGAATGATTGAGTGGCTGGTGCCCTCCACGGCCTTCAAAGCCGTTGTCTGTAGTAAACC
TGCAGAGCTGGGTTCGATTCCCAGGCGTTCCCGCTA
Downstream region at tRNA end position 
gaaaagtctg
Secondary structure (Cloverleaf model)
>SRA1007083	SeC	TCA
                   t      GCTA gaaaagtctg
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T + G
                     G - C
                     A   G          T T
                    T     G A C C C     A
      C G G        T      | | | | |     G
    T       T G A G       C T G G G     C
    G         | | |                 T T
    G       C C T C
      T G C        C     TGTCTGTAGTAAACCTGCAGAG
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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