The detailed information of tRNA gene sequence


Sequence ID>SRA1007103
Genome IDSRR020488.334971
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 136
End posion on genome 62
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
ttattattat
tRNA gene sequence 
GCCCTCGTGGCTCAACTGGATAGAGCACTGGGTTTCGGCCCCAGCGGTTACAGGTTCGAA
TCCTGTCGAGGGTACat
Downstream region at tRNA end position 
tctaaagcta
Secondary structure (Cloverleaf model)
>SRA1007103	Arg	TCG
                   t      ACat tctaaagcta
                     G + T
                     C - G
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     T G T C C     A
      C A A        G      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     CGGTT
                    C - G
                    T - A
                    G - C
                    G - C
                    G - C
                  T       C
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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