The detailed information of tRNA gene sequence


Sequence ID>SRA1007108
Genome IDSRR020488.337003
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 80
End posion on genome 166
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttgaacatgC
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTCGAAAGCGAACGATTCGAAATCGTTTAATAGGCAACTATTC
GTGGGTTCGAATCCCACCCTCTCCGTtt
Downstream region at tRNA end position 
gaactaatgc
Secondary structure (Cloverleaf model)
>SRA1007108	Ser	CGA
                   C      GTtt gaactaatgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TAATAGGCAACTATTC
                    A - T
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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