The detailed information of tRNA gene sequence


Sequence ID>SRA1007130
Genome IDSRR020488.345951
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 215
End posion on genome 143
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
acttaaaatt
tRNA gene sequence 
GCCCTTGTAGCTCAGCGGTAGAGCACTCCCTTGGTAAGGGAGAGGTCTCGGGTTCAAGTC
CCGACGAGGGCACtc
Downstream region at tRNA end position 
gcgggatagc
Secondary structure (Cloverleaf model)
>SRA1007130	Thr	GGT
                   t      ACtc gcgggatagc
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     T + G
                     G - C          T G
                    T     A G C C C     A
        G A        A      | | | | |     A
      C     C T C G       T C G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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