The detailed information of tRNA gene sequence


Sequence ID>SRA1007135
Genome IDSRR020488.348472
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 106
End posion on genome 24
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
tgcttccctt
tRNA gene sequence 
GCGGGTGTGGTGAAATTGGTAGACACGCTAGACTTAGGATCTAGTGCTTCACGGCATGGG
GGTTCGAGTCCCTCCACCCGCACtt
Downstream region at tRNA end position 
ttattctctt
Secondary structure (Cloverleaf model)
>SRA1007135	Leu	TAG
                   t      ACtt ttattctctt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C T C C C     A
      T A A        G      | + | | |     G
    T       A G T G       G G G G G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TGCTTCACGGCAT
                    C - G
                    T - A
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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