The detailed information of tRNA gene sequence


Sequence ID>SRA1007143
Genome IDSRR020488.350679
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 15
End posion on genome 90
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tttatcaaaa
tRNA gene sequence 
GGGGGATTAGCTCAGCTGGGAGAGCGCCTGATTTGCATTCAGGAGGTCAGCGGTTCGATC
CCGCTATCCTCCACCA
Downstream region at tRNA end position 
aaaaacactt
Secondary structure (Cloverleaf model)
>SRA1007143	Ala	TGC
                   a      ACCA aaaaacactt
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     A - T
                     T - A          C T
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  T       T
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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