The detailed information of tRNA gene sequence


Sequence ID>SRA1007149
Genome IDSRR020488.354798
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 137
End posion on genome 212
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
cgttgcagct
tRNA gene sequence 
GCCGCCGTAGCTCAGCAGGTAGAGCAGCTGATTTGTAATCAGAAGGTCGGCGGTTCGATT
CCGTCTGGCGGCACCA
Downstream region at tRNA end position 
aacctgtgaa
Secondary structure (Cloverleaf model)
>SRA1007149	Thr	TGT
                   t      ACCA aacctgtgaa
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G + T          T T
                    T     C T G C C     A
      C G A        A      | + | | |     G
    A       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G   A
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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