The detailed information of tRNA gene sequence


Sequence ID>SRA1007171
Genome IDSRR020488.362617
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 100
End posion on genome 25
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tcttatatgc
tRNA gene sequence 
GACCCCTTCGTCTAGAGGCCTAGGACACTGGCCTTTCACGCCGGCAACACGGGTTCGAAT
CCCGTAGGGGTCGCCA
Downstream region at tRNA end position 
ctcttttctc
Secondary structure (Cloverleaf model)
>SRA1007171	Glu	TTC
                   c      GCCA ctcttttctc
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     T G C C C     A
      A G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     CAAC
                    C - G
                    T + G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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