The detailed information of tRNA gene sequence


Sequence ID>SRA1007176
Genome IDSRR020488.363424
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 84
End posion on genome 158
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
actgtatttt
tRNA gene sequence 
GCCCGTGTGGCGCAATTGGATAGCGCACCAGACTTCTAATCTGGGGGTTCCGGGTTCAAG
TCCCGGCATGGGCTCtt
Downstream region at tRNA end position 
taaatcaatt
Secondary structure (Cloverleaf model)
>SRA1007176	Arg	TCT
                   t      TCtt taaatcaatt
                     G - C
                     C - G
                     C - G
                     C - G
                     G + T
                     T - A
                     G - C          T G
                    T     G G C C C     A
      T A A        G      | | | | |     A
    T       C G C G       C C G G G     C
    G       | | | |                 T T
    G       G C G C
      A T A        A     GGGTT
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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