The detailed information of tRNA gene sequence


Sequence ID>SRA1007210
Genome IDSRR020488.377032
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 48
End posion on genome 121
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
ttaggaaaaa
tRNA gene sequence 
GCCCCGATAGTTAAATGGTATAACAGATCCATGGTAAGGATCAGTTTCCAGTTCAATTCT
GGGTCGGGGCACCA
Downstream region at tRNA end position 
attattttta
Secondary structure (Cloverleaf model)
>SRA1007210	Thr	GGT
                   a      ACCA attattttta
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     A - T          T T
                    T     G G G T C     A
        A A        A      + | | | |     A
      T     A T T G       T C C A G     C
      G     | | | |                 T T
      G     T A A C
        T A        A     AGTT
                    G - C
                    A - T
                    T - A
                    C - G
                    C - G
                  A       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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