The detailed information of tRNA gene sequence


Sequence ID>SRA1007223
Genome IDSRR020488.380324
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 180
End posion on genome 271
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
taatccaatc
tRNA gene sequence 
GGAAGGGTGGCTGAGTCCGGCCTAAGGCGCTCGATTCGAAATCGAGTGAACGGGAAACCG
TTCCGTGGGTTCGAATCCCACCCCTTCCGCCA
Downstream region at tRNA end position 
tttcacccct
Secondary structure (Cloverleaf model)
>SRA1007223	Ser	CGA
                   c      GCCA tttcacccct
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C T G A        G      | | | | |     G
  C         G T C G       G T G G G     C
  G           + | |                 T T
  G         A G G C
    C C T A        G     TGAACGGGAAACCGTTCC
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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