The detailed information of tRNA gene sequence


Sequence ID>SRA1007225
Genome IDSRR020488.380575
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 152
End posion on genome 236
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ctttaaataa
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTCGAAAGCGAACGACTCGAAATCGTTTAATAGTAAACTATTC
GTGGGTTCGAATCCCACCCTCTCCGttt
Downstream region at tRNA end position 
agttatcttc
Secondary structure (Cloverleaf model)
>SRA1007225	Ser	CGA
                   a      Gttt agttatcttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TAATAGTAAACTATTC
                    A - T
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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