The detailed information of tRNA gene sequence


Sequence ID>SRA1007256
Genome IDSRR020488.389871
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 203
End posion on genome 111
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tatggtgtgc
tRNA gene sequence 
GGAGAGGTACCGAAGTGGTCATAACGGCGCTGACTCGAAATCAGATGGTCGGCTTGTTCC
GACACGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
agactaaatg
Secondary structure (Cloverleaf model)
>SRA1007256	Ser	CGA
                   c      GCCA agactaaatg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       G A G G G     C
  T           | | |                 T T
  C         A C G G
    A T A          C     TGGTCGGCTTGTTCCGACAC
                    G   A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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