The detailed information of tRNA gene sequence


Sequence ID>SRA1007268
Genome IDSRR020488.394166
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 109
End posion on genome 32
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cattccattT
tRNA gene sequence 
GGTCCTATAGCTCAGTTGGTTAGAGTAGATGACTCATAATCATTTGGTCCCTGGTTCGAG
CCCAGGTGGGACCACCC
Downstream region at tRNA end position 
ctaaagccct
Secondary structure (Cloverleaf model)
>SRA1007268	Met	CAT
                   T      ACCC ctaaagccct
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     T + G
                     A - T          C G
                    T     G G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        A     TGGTC
                    G + T
                    A - T
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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