The detailed information of tRNA gene sequence


Sequence ID>SRA1007278
Genome IDSRR020488.396245
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 205
End posion on genome 279
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tactaaaaaa
tRNA gene sequence 
GGGCGATTAGCTCAGTTGGTTAGAGCACTGCGTTTACACCGCAGGTGTCGGGAGTTCGAA
TCTCTCATCGCCCACtt
Downstream region at tRNA end position 
annnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1007278	Val	TAC
                   a      ACtt annnnnnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T A
                    T     C T C T C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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