The detailed information of tRNA gene sequence


Sequence ID>W1810578881
Genome IDQEQA01000003
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesAggregatibacter aphrophilus C2009017515 [QEQA]
Start position on genome 162123
End posion on genome 162047
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aatgctcacc
tRNA gene sequence 
GCCCCCATAGCTCAGTCGGTCAGAGCAGTCGACTCATAATCGATTGGTCACAGGTTCAAG
TCCTGTTGGGGGCACCA
Downstream region at tRNA end position 
ttcttaactt
Secondary structure (Cloverleaf model)
>W1810578881	Met	CAT
                   c      ACCA ttcttaactt
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     T G T C C     A
      T G A        A      | | | | |     A
    C       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     TGGTC
                    G + T
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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