The detailed information of tRNA gene sequence


Sequence ID>SRA1007290
Genome IDSRR020488.399390
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 279
End posion on genome 206
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GCTTCCTTAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTGGGCCGCAGGTTCGAA
TCCTGCAGGAAGCGtac
Downstream region at tRNA end position 
aaacgaaaca
Secondary structure (Cloverleaf model)
>SRA1007290	Arg	TCT
                   n      Gtac aaacgaaaca
                     G - C
                     C - G
                     T - A
                     T - A
                     C - G
                     C - G
                     T - A          T A
                    T     C G T C C     A
      C G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGCC
                    A - T
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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