The detailed information of tRNA gene sequence


Sequence ID>SRA1007308
Genome IDSRR020488.405735
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 144
End posion on genome 220
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
aaataaaact
tRNA gene sequence 
GCATCCGTAGTTCAACTGGATAGAATACCAGATTTCGGCTCTGGGGGCTGAGGGTTCGAA
TCCTTCCGGATGCACAA
Downstream region at tRNA end position 
aaggtctttt
Secondary structure (Cloverleaf model)
>SRA1007308	Arg	TCG
                   t      ACAA aaggtctttt
                     G - C
                     C - G
                     A - T
                     T - A
                     C - G
                     C - G
                     G - C          T A
                    T     C T T C C     A
      C A A        A      | | + | |     G
    T       C T T G       G A G G G     C
    G       | | | +                 T T
    G       G A A T
      A T A        A     GGGCT
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  T       C
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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