The detailed information of tRNA gene sequence


Sequence ID>SRA1007318
Genome IDSRR020488.409259
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 185
End posion on genome 260
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
ttaaaatgat
tRNA gene sequence 
GGCTTCGTAGCTCAGGTGGTAGAGCAGAGCCCTGAAAAGGCTTGTGTCGCTGGTTCGAGT
CCCGCCGAAGCCACCA
Downstream region at tRNA end position 
catcatggtg
Secondary structure (Cloverleaf model)
>SRA1007318	Phe	GAA
                   t      ACCA catcatggtg
                     G - C
                     G - C
                     C - G
                     T - A
                     T - A
                     C - G
                     G - C          T G
                    T     C G C C C     A
      G G A        A      | |   | |     G
    T       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G + T
                    A - T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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