The detailed information of tRNA gene sequence


Sequence ID>SRA1007321
Genome IDSRR020488.410093
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 226
End posion on genome 152
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tccctaccac
tRNA gene sequence 
AGGCCATTAGTGTTAGCGGTAGCACGTCAGACTCCAAATCTGAAAGCAGGGGTTCGAGCC
CTCTATGGTCTGCCA
Downstream region at tRNA end position 
aaaaaaagtg
Secondary structure (Cloverleaf model)
>SRA1007321	Trp	CCA
                   c      GCCA aaaaaaagtg
                     A - T
                     G - C
                     G + T
                     C - G
                     C - G
                     A - T
                     T - A          C G
                    T     T C T C C     A
      G A T        A      | | + | |     G
    C       T G T G       A G G G G     C
    G       + | | |                 T T
    G       G C A C
      T A          G     AAGC
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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