The detailed information of tRNA gene sequence


Sequence ID>SRA1007327
Genome IDSRR020488.411488
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 196
End posion on genome 99
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
ttactagtgc
tRNA gene sequence 
TGGGGAGTGGCGGAATTGGCAGACGCACCTGACTGTTTCNCAGGCGGTGATCAGGCGATA
AGCCCACCTTGGAGGTTCGAATCCTTCCTCTCCAGCCA
Downstream region at tRNA end position 
tagtgcggac
Secondary structure (Cloverleaf model)
>SRA1007327	Asn	GTT
                   c      GCCA tagtgcggac
                     T - A
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     G - C          T A
                    T     C T T C C     A
      T A A        G      | + | | |     G
    T       G G C G       G G A G G     C
    G         | | |                 T T
    G       A C G C
      C A G        A     CGGTGATCAGGCGATAAGCCCACCTT
                    C - G
                    C - G
                    T - A
                    G - C
                    A   N
                  C       C
                  T       T
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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